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From International Center for Computational Logic
Selecting patients for clinical trials is Selecting patients for clinical trials is very labor-intensive. Our goal is to develop an automated system that can support doctors in this task. This paper describes a major step towards such a system: the automatic translation of clinical trial eligibility criteria from natural language into formal, logic-based queries. First, we develop a semantic annotation process that can capture many types of clinical trial criteria. Then, we map the annotated criteria to the formal query language. We have built a prototype system based on state-of-the-art NLP tools such as Word2Vec, Stanford NLP tools, and the MetaMap Tagger, and have evaluated the quality of the produced queries on a number of criteria from clinicaltrials.gov.umber of criteria from clinicaltrials.gov.  +
Selecting patients for clinical trials is Selecting patients for clinical trials is very labor-intensive. Our goal is to develop an automated system that can support doctors in this task. This paper describes a major step towards such a system: the automatic translation of clinical trial eligibility criteria from natural language into formal, logic-based queries. First, we develop a semantic annotation process that can capture many types of clinical trial criteria. Then, we map the annotated criteria to the formal query language. We have built a prototype system based on state-of-the-art NLP tools such as Word2Vec, Stanford NLP tools, and the MetaMap Tagger, and have evaluated the quality of the produced queries on a number of criteria from clinicaltrials.gov.umber of criteria from clinicaltrials.gov.  +
Datum„Datum <span style="font-size:small;">(Date)</span>“ ist ein <a href="/web/Spezial:Datentypen/Date" title="Spezial:Datentypen/Date">Datentyp</a> für Datumswerte. Er wird Attributen mit Hilfe eines von <a rel="nofollow" class="external text" href="https://www.semantic-mediawiki.org/wiki/Help:Special_properties">Semantic MediaWiki</a> bereitgestellten, softwareseitig fest definierten Attributs (Spezialattribut), zugeordnet.
16. September 2019, 13:00:00  +
16. September 2019, 14:00:00  +
16. September 2019, 13:00:00  +
Automatic translation of clinical trial eligibility criteria into formal queries  +
Automatic translation of clinical trial eligibility criteria into formal queries  +
Vortrag  +
Chao Xu  +
Anzeigetitel„Anzeigetitel <span style="font-size:small;">(Display title of)</span>“ ist ein softwareseitig fest definiertes Attribut, das einen eindeutigen Anzeigetitel zu einem Objekt speichert und ihm zuweist. Es wird von <a rel="nofollow" class="external text" href="https://www.semantic-mediawiki.org/wiki/Help:Special_properties">Semantic MediaWiki</a> zur Verfügung gestellt.
Automatic translation of clinical trial eligibility criteria into formal queries  +
Zuletzt geändert„Zuletzt geändert <span style="font-size:small;">(Modification date)</span>“ ist ein softwareseitig fest definiertes Attribut, das das Datum der letzten Änderung einer Seite speichert. Es wird von <a rel="nofollow" class="external text" href="https://www.semantic-mediawiki.org/wiki/Help:Special_properties">Semantic MediaWiki</a> zur Verfügung gestellt.
13. September 2019, 12:08:45  +
Hat Abfrage„Hat Abfrage <span style="font-size:small;">(Has query)</span>“ ist ein softwareseitig fest definiertes Attribut, das die Metainformationen einer Abfrage als <a rel="nofollow" class="external text" href="https://www.semantic-mediawiki.org/wiki/Subobject">Subobjekt</a> speichert. Es wird von <a rel="nofollow" class="external text" href="https://www.semantic-mediawiki.org/wiki/Help:Special_properties">Semantic MediaWiki</a> zur Verfügung gestellt.
 
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